Publications and creative works by faculty in the Department of Computer Science, College of Science and Mathematics, are collected here.

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Submissions from 2007

Dynamic and Parallel Approaches to Optimal Evolutionary Tree Construction, Anupam Bhattacharjee, Kazi Zakia Sultana, and Zalia Shams (2007)

Prediction of Modulators of Pyruvate Kinase in Smiles Text using Aprori Methods, Jason Caronna, Rojita Sharma, Jonathan Marra, Virginia L. Iuorno, Katherine Herbert, and Jeffrey H. Toney (2007)

An Interdisciplinary Undergraduate Science Informatics Degree in a Liberal Arts Context, Dorothy Deremer and Katherine Herbert (2007)

Biological Data Cleaning: A Case Study, Katherine Herbert and Jason T.L. Wang (2007)

Pre-College Student Learning of Web Development Technologies, John Jenq and Carl Bredlau (2007)

Legal Issues in Grid Collaborative Environments, Irene Kafeza, Eleanna Kafeza, and Constantine Coutras (2007)

A Study of Phylogenetic Tools for Genomic Nomenclature Data Cleaning, Jonathan D. Marra, Katherine Herbert, and Jason T.L. Wang (2007)

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Weighted Additive Criterion for Linear Dimension Reduction, Jing Peng and Stefan Robila (2007)

Comparative Correctness Testing, Michael Alexis Ponniah and John Jenq (2007)

New Developments in Target Detection in Hyperspectral Imagery using Spectral Metrics and Spectra Extraction, Stefan Robila (2007)

Grid Computing for Hyperspectral Data Processing, Stefan Robila and Nicholas A. Senedzuk (2007)

On Resource Bipartitioning Problem, Zalia Shams, Shahina Ferdous, Kazi Zakia Sultana, and Md Saidur Rahman (2007)

AutoDomainMine: A Graphical Data Mining System for Process Optimization, Aparna Varde, Elke A. Rundensteiner, and Richard D. Sisson (2007)

Learning the Relative Importance of Features in Image Data, Aparna Varde, Elke Rundensteiner, Giti Javidi, Ehsan Sheybani, and Jianyu Liang (2007)

LearnMet: Learning Domain-Specific Distance Metrics for Plots of Scientific Functions, Aparna Varde, Elke Rundensteiner, Carolina Ruiz, Mohammed Maniruzzaman, and Richard Sisson (2007)

A Heuristic Fault-Tolerant Routing Algorithm in Mesh using Rectilinear-Monotone Polygonal Fault Blocks, Dajin Wang (2007)

A Power-Balancing Scheme for Clustered Wireless Sensor Networks, Dajin Wang (2007)

Toward an Integrated RNA Motif Database, Jason T.L. Wang, Dongrong Wen, Bruce A. Shapiro, Katherine Herbert, Jing Li, and Kaushik Ghosh (2007)

Biostatistical Considerations of the Use of Genomic DNA Reference in Microarrays, Yunfeng Yang, Michelle Zhu, Liyou Wu, and Jizhong Zhou (2007)

A Computational Approach to Understand Arabidopsis Thaliana and Soybean Resistance to Fusarium Solani (Fsg), Jiazheng Yuan, Michelle Zhu, M. Javed Iqbal, Jack Y. Yang, and David A. Lightfoot (2007)

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Optimal Pipeline Decomposition and Adaptive Network Mapping to Support Distributed Remote Visualization, Michelle Zhu, Qishi Wu, Nageswara S.V. Rao, and Sitharama Iyengar (2007)

Submissions from 2006

Minimal Circuit and State Space Realization of Generalized 3-D Lattice-Ladder Discrete Filters, George Antoniou (2006)

Reactivity and Safe Learning in Multi-Agent Systems, Bikramjit Banerjee and Jing Peng (2006)

Rvσ(T)a Unifying Approach to Performance and Convergence in Online Multiagent Learning, Bikramjit Banerjee and Jing Peng (2006)

Unifying Convergence and No-Regret in Multiagent Learning, Bikramjit Banerjee and Jing Peng (2006)

An Ensemble Approach to Robust Biometrics Fusion, Costin Barbu, Raja Iqbal, and Jing Peng (2006)

Automated Gene Processing and Exon Sequence Retrieval, Tazeen Fatima, Jonathan Marra, Ronald Realubit, Georgiy Schegolev, and Katherine Herbert (2006)

Efficient Parallel Rendering on Hypercube, John Jenq (2006)

Some thoughts about Anti-Phishing, John Jenq and Rex Cheng (2006)

A Coloring Based Backbone Construction Algorithm in Wireless Ad Hoc Network, Zhiwei Lin, Li Xu, Dajin Wang, and Jianliang Gao (2006)

Identification of Gsr1 in Arabidopsis Thaliana: A Locus Inferred to Regulate Gene Expression in Response to Exogenous Glutamine, R. Meyer, Jiazheng Yuan, Ahmed Jawaad Afzal, M. Javed Iqbal, Michelle Zhu, G. Garvey, and David A. Lightfoot (2006)

Learning Optimal Filter Representation for Texture Classification, Zhang Peng, Jing Peng, and Bill Buckles (2006)

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Societal Aspects of Phishing, James W. Ragucci and Stefan Robila (2006)

A Class of Detection Filters for Targets and Anomalies in Multispectral / Hyperspectral Imagery, Stefan Robila (2006)

Real Time Processing of Hyperspectral Images, Stefan Robila (2006)

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Use of Remote Sensing Applications and Its Implications to the Society, Stefan Robila (2006)

New Approaches for Feature Extraction in Hyperspectral Imagery, Stefan Robila and Lukasz Maciack (2006)

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Don't Be a Phish: Steps in User Education, Stefan Robila and James W. Ragucci (2006)

Data Mining in Heat Treatment, Richard D. Sisson and Aparna Varde (2006)

MatML: XML for Information Exchange with Materials Property Data, Aparna Varde, Edwin F. Begley, and Sally Fahrenholz-Mann (2006)

Estimating Heat Transfer Coefficients as a Function of Temperature By Data Mining, Aparna Varde, Elke A. Rundensteiner, Mohammed Maniruzzaman, and Richard D. Sisson (2006)

Designing Semantics-Preserving Cluster Representatives for Scientific Input Conditions, Aparna Varde, Elke A. Rundensteiner, Carolina Ruiz, David C. Brown, Mohammmed Maniruzzaman, and Richard D. Sisson (2006)

A Graph-Center-Based Scheme for Energy-Efficient Data Collection in Wireless Sensor Networks, Dajin Wang (2006)

An Algorithm to Embed Hamiltonian Cycles in Crossed Cubes, Dajin Wang (2006)

An Empirical Study of Hierarchical Division for Mesh-Structured Networks, Dajin Wang (2006)

A Scalable Framework for Distributed Virtual Reality using Heterogeneous Processors, Qishi Wu, Jinzhu Gao, and Michelle Zhu (2006)

System Design for on-Line Distributed Computational Visualization and Steering, Qishi Wu, Michelle Zhu, and Nageswara S.V. Rao (2006)

A New Kernel Method for RNA Classification, Xiaoming Wu, Jason T.L. Wang, and Katherine Herbert (2006)

PhyloMiner: A Tool for Evolutionary Data Analysis, Sen Zhang, Katherine Herbert, Jason T.L. Wang, William H. Piel, and David R.B. Stockwell (2006)

A New Approach to Identify Functional Modules using Random Matrix Theory, Michelle Zhu, Qishi Wu, Yunfeng Yang, and Jizhong Zhou (2006)

Submissions from 2005

N-Order Linear State Space Systems: Computing the Transfer Function using the DFT, George Antoniou (2005)

Generalized N-Dimensional K-Order Systems: Computing the Transfer Function, George Antoniou and Marinos T. Michael (2005)

Generalized Second-Order Two-Dimensional Systems: Computing the Transfer Function, George Antoniou and Marinos T. Michael (2005)

N-Dimensional K-Order Systems: Computing the Transfer Function, George Antoniou and Marinos T. Michael (2005)

Efficient Learning of Multi-Step Best Response, Bikramjit Banerjee and Jing Peng (2005)

Efficient No-Regret Multiagent Learning, Bikramjit Banerjee and Jing Peng (2005)

Classifier Fusion using Shared Sampling Distribution for Boosting, Costin Barbu, Raja Iqbal, and Jing Peng (2005)

Boosting in Classifier Fusion vs. Fusing Boosted Classifiers, Costin Barbu, Kun Zhang, Jing Peng, and Bill Buckles (2005)

Pocket-PC Boolean Function Simplification, Ledion Bitincka and George Antoniou (2005)

Large Margin Nearest Neighbor Classifiers, Carlotta Domeniconi, Dimitrios Gunopulos, and Jing Peng (2005)

Kernel Vector Approximation Files for Relevance Feedback Retrieval in Large Image Databases, Douglas R. Heisterkamp and Jing Peng (2005)

Lineage Path Integration for Phylogenetic Resources, Katherine Herbert, Shashikanth Puspati, Jason T.L. Wang, and William H. Piel (2005)

Clustering using Self Organized Map on Rmesh, John Jenq (2005)

Online Interactive Home Work Grading System, John Jenq, Micheal Alexis Ponniah, Irina Ashkenazi, and Ramazan Burus (2005)

A New Fault Information Model for Fault-Tolerant Adaptive and Minimal Routing in 3-D Meshes, Zhen Jiang, Jie Wu, and Dajin Wang (2005)

Design Patterns for Database Pedagogy - a Proposal, Thomas J. Marlowe, Cyril S. Ku, and James Benham (2005)

Networking for Large-Scale Science: Infrastructure, Provisioning, Transport and Application Mapping, Nageswara S. Rao, Steven M. Carter, Qishi Wu, William R. Wing, Michelle Zhu, Anthony Mezzacappa, Malathi Veeraraghavan, and John M. Blondin (2005)

An Investigation of Spectral Metrics in Hyperspectral Image Preprocessing for Classification, Stefan Robila (2005)

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Distributed Computing and Computer Security Education, Stefan Robila (2005)

Subpixel Target Detection in Hyperspectral Data using Higher Order Statistics Source Separation Algorithms, Stefan Robila (2005)

Using Spectral Distances for Speedup in Hyperspectral Image Processing, Stefan Robila (2005)

Writing Requirements in Computer Security, Stefan Robila and Carl Bredlau (2005)

Spectral Matching Accuracy in Processing Hyperspectral Data, Stefan Robila and Andrew Gershman (2005)

Learning Semantics-Preserving Distance Metrics for Clustering Graphical Data, Aparna Varde, Elke A. Rundensteiner, Carolina Ruiz, Mohammed Maniruzzaman, and Richard D. Sisson (2005)

Fault-Tolerant and Deadlock-Free Routing in 2-D Meshes using Rectilinear-Monotone Polygonal Fault Blocks, Jie Wu and Dajin Wang (2005)

On Unit Task Linear-Nonlinear Two-Cluster Scheduling Problem, Zhichun Xiao, Wing Ning Li, and John Jenq (2005)

Learning Through Changes: An Empirical Study of Dynamic Behaviors of Probability Estimation Trees, Kun Zhang, Zujia Xu, Jing Peng, and Bill Buckles (2005)

Kernel Pooled Local Subspaces for Classification, Peng Zhang, Jing Peng, and Carlotta Domeniconi (2005)

Discriminant Analysis: A Unified Approach, Peng Zhang, Jing Peng, and Norbert Riedel (2005)

Finite Sample Error Bound for Parzen Windows, Peng Zhang, Jing Peng, and Norbert Riedel (2005)

New Subspace Methods for ATR, Peng Zhang, Jing Peng, and S. Richard F. Sims (2005)

Nonlinear Discriminant Adaptive Nearest Neighbor Classifiers, Peng Zhang, Jing Peng, and S. Richard F. Sims (2005)

Empirical Comparison of Robustness of Classifiers on IR Imagery, Peng Zhang, Jing Peng, Kun Zhang, and S. Richard F. Sims (2005)

CHEETAH: Circuit-Switched High-Speed End-to-End Transport Architecture Testbed, Xuan Zheng, Malathi Veeraraghavan, Nageswara S.V. Rao, Qishi Wu, and Michelle Zhu (2005)

On Optimal Mapping of Visualization Pipeline Onto Linear Arrangement of Network Nodes, Michelle Zhu, Qishi Wu, Nageswara S.V. Rao, and S. Sitharama Iyengar (2005)

Fault-Tolerance Schemes for Hierarchical Mesh Networks, Jason Zurawski and Dajin Wang (2005)

Submissions from 2004

On the Realization of 2D Lattice-Ladder Discrete Filters, George Antoniou (2004)

Computing the Transfer Function for Second-Order 2D Systems, George Antoniou and Marinos T. Michael (2004)

Second-Order Two-Dimensional Systems Computing the Transfer Function, George Antoniou and Marinos T. Michael (2004)

Performance Bounded Reinforcement Learning in Strategic Interactions, Bikramjit Banerjee and Jing Peng (2004)

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The Role of Reactivity in Multiagent Learning, Bikramjit Banerjee and Jing Peng (2004)

On-Policy Concurrent Reinforcement Learning, Bikramjit Banerjee, Sandip Sen, and Jing Peng (2004)

PDA-Based Boolean Function Simplification: A Useful Educational Tool, Ledion Bitincka and George Antoniou (2004)

Aspect-Oriented Design of Sensor Networks, Richard R. Brooks, Michelle Zhu, Jacob Lamb, and S. Sitharama Iyengar (2004)

Heuristic Fault-Tolerant Routing in Mesh using Minimal-Connected-Component Fault Blocks, Gui Hai Chen, Peng Du, Dajin Wang, and Li Xie (2004)

Improving Image Retrieval Performance By Inter-Query Learning with One-Class Support Vector Machines, Iker Gondra, Douglas R. Heisterkamp, and Jing Peng (2004)

BIO-Ajaxan Extensible Framework for Biological Data Cleaning, Katherine Herbert, Narain H. Gehani, William H. Piel, Jason T.L. Wang, and Cathy H. Wu (2004)

XML Clustering By Principal Component Analysis, Jianghui Liu, Jason T.L. Wang, Wynne Hsu, and Katherine Herbert (2004)

An Exact Scheduling Algorithm for Two, Linear-Nonlinear Clusters, with a Common Communication Delay, Wing Ning Li, Zhichun Xiao, and John Jenq (2004)

Adaptive Quasiconformal Kernel Nearest Neighbor Classification, Jing Peng, Douglas R. Heisterkamp, and Ho Kwok Dai (2004)